Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFYDDDADLSIIQGRKVGVIGYGSQGHAHSLSLRDS------GVQVRVGLKQGSRSRPKVEEQGLDVDTPA-----EVAKWADVVMVLAPDTAQAEIFAGDIEPNLKPGDALFFGHGL---NVHFGLIKPPADVAVAMVAPKGPGHLVRRQFVDGK-----GVPCLVAVEQDPRGDGLALALSYAKAIGGTRAGVIKTTFKDETETDLFGEQTVLCGGTEELVKAGFEVMVEAGYPAELAYFEVLHELK-LIVDLMYEGGLARMYYSVSDTAEFGGYLSGPRVIDAGTKERMRDILREIQDGSFVHKLVADVEGGNKQLEELRRQNAEHPIEVVGKKLRDLMSWVDRPITETA |
3FR8 Chain:A ((55-307)) | --------------KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLISDAAQADNYE-KIFSHMKPNSILGLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPF--TFATTLEQEYKSDIFGERGILLGAVHGIVEALFRRYTEQGMDEEMAYKNTVEGITGIISKTISKKGMLEVYNSLTE----------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FR8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99443 for 1718 contacts (-57.9/contact) +
2D Compatibility (PS) -26291 + (NN) -16720 + (LL) 6036
1D Compatibility (HY) -14400 + (ID) 3900
Total energy: -154718.0 ( -90.06 by residue)
QMean score : 0.327
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