Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR
1K78 Chain:A ((30-77))
-----GRPLPDVVRQRIVELAHQG--------VRPCDISRQLRV-SHGCVSKILGRYYETGS----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1K78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31464 for 285 contacts (-110.4/contact) +
2D Compatibility (PS) -5364 + (NN) -3109 + (LL) 3508
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -38529.0 ( -135.19 by residue)
QMean score : 0.830
(partial model without unconserved sides chains):
PDB file :
Tito_1K78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K78-query.scw
PDB file :
Tito_Scwrl_1K78.pdb
: