Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSTPSATVAPVKRIPYAEASRALLRDSVLDAMRDLLLTRDWSAITLSDVARAAGISRQTIYNEFGSRQGLAQGYALRLADRLVDNVHASL--------DANVGNFYEAFLQGFRSFFAESAADPLVISLLTGVAKPDLLQLITTDSAPIITRASARLAPAFTDTWVATTDNDANVLSRAIVRLCLSYVSMPPEADHDVAADLARLITPFAERHGVINVP |
3TP3 Chain:A ((28-119)) | --------------------------AILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAV----LLTLLDRVVNQADMALQTLAENPADTDRENMWRTWINVFFETFGSHKA------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44532 for 503 contacts (-88.5/contact) +
2D Compatibility (PS) -9176 + (NN) -4177 + (LL) 9188
1D Compatibility (HY) -7600 + (ID) 1350
Total energy: -57647.0 ( -114.61 by residue)
QMean score : 0.566
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