Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLPADPSPTLSAYAHPERLVTADWLSAHMGA----PGLAIVESD-------EDVLLYDVGHIPGAVKIDWHT--DLNDPRVRDYINGEQFAELMDRKGIARDDTVVIYG--DKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVPTKTCTGYPVVQRNDAPIRAFRDDVLAILGAQ--PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLYDFINPD--DQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGEEPGVVPVV |
| 1RHS Chain:A ((9-278)) | -------------------LVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSE-PSRPEPAIFKATLNRSLLKTY-EQVLENLESKRFQLVDSRAQGRYLGTQPE----PDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVDLTKPLIAT-RKGVTACHI-ALAAYLCGKPDVAIYDGSWFEW-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105855 for 2032 contacts (-52.1/contact) +
2D Compatibility (PS) -27289 + (NN) -18684 + (LL) 2268
1D Compatibility (HY) -14000 + (ID) 4000
Total energy: -167560.0 ( -82.46 by residue)
QMean score : 0.449
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