Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGVLTLDAAFLGSVPADLGKALLERARADCGPVLHRAIES---MREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGVAILLGDALHATAVRILTGLTDECVA-----VRAIRRLQ--MSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALNSRSEAATELAALYQAPAAMTASDVERATALVKVAGGGHVAQRCADERIQAAIAALPDAVRSPDLIALSQLICRREC |
| 5E8L Chain:A ((22-276)) | ---------------------------------LVNKALDSAVPLREPLKIHEAMRYSLL---------AGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDIS------VGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTK------------LIADKLTYPKIMGLEKSREFAEKL------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5E8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166122 for 1782 contacts (-93.2/contact) +
2D Compatibility (PS) -23756 + (NN) -12086 + (LL) 7644
1D Compatibility (HY) -16800 + (ID) 4100
Total energy: -215220.0 ( -120.77 by residue)
QMean score : 0.401
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