Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPEGALYLRMDDFPARLVVVPGEHDRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHGTALEHRRVVSPYG--HRFVTGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPMPTSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGG-FDIEFGCEGRQVDDRDWIARESTAVSLWGHDFTVGARG |
1KW8 Chain:B ((1-288)) | -SIERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAGDAALY-RADQRAWRIAVQPGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDI--QM--GPETSVPA--HFLHCNGRHHTIALAAFPIPKRIHHFMLQANTIDDVGYAFDR-LDAAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGPRTVDSSWTVARHSR-TAMWGHKSV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136221 for 2400 contacts (-56.8/contact) +
2D Compatibility (PS) -30982 + (NN) -18552 + (LL) 836
1D Compatibility (HY) -19200 + (ID) 5450
Total energy: -209569.0 ( -87.32 by residue)
QMean score : 0.528
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