Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKVTVTLVDDFDGSGAADETVEFGLDGVTYEIDLSTKNATKLRGDLKQWVAAGRRVGGRRRGRSGSG--RGRGAIDREQSAAIREWARRNGHNVSTRGRIPADVIDAYHAAT
3A4U Chain:A ((11-98))
------------------------LPHRRFEYKYSFKGPHLVQSDGTVPFWAHAGNAIPSSDQIRVAPSLKSQRGSVWTKTKAAFENWEVEVTFRVTGRGRIGADGLAIWYA--
General information:
TITO was launched using:
RESULT:
Template:
3A4U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11084 for 426 contacts (26.0/contact) +
2D Compatibility (PS) -8868 + (NN) -2099 + (LL) 1728
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -3505.0 ( -8.23 by residue)
QMean score : 0.106
(partial model without unconserved sides chains):
PDB file :
Tito_3A4U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A4U-query.scw
PDB file :
Tito_Scwrl_3A4U.pdb
: