Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEILVTGGAGFQGSHLTESLLANGHWVTV-LDK-SSRNAVRNMQGFRSHDRAAFISGSVTDGQTIDRAVRDHH--VVFHLAAHVNVDQSLGDPESFLETNVMGTYRVLEAVRRYRN----------RLIYVSTCEVYGDGHNLKEGER------LDEHAELKPNSPYGASKAAADRLCYSYFRSYGLDVTIVRPFNIFGVRQKAGRFGALIPRLVRQGINGEGLTIFGAGSATRDYLYVSDIVGAYNLVLRTPTLRGQAINFASGKDTRVRDIVEYVAD----------KFGARIEHRDARPGEVQRFPADI-SLAKSIGFQPQVEIWDGIDRYINWAKDQPQYPYEQDGFSGSSVL |
| 1G1A Chain:A ((1-340)) | MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEK---LIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVV-TEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQW------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172206 for 2577 contacts (-66.8/contact) +
2D Compatibility (PS) -32879 + (NN) -6437 + (LL) 376
1D Compatibility (HY) -19600 + (ID) 5050
Total energy: -235796.0 ( -91.50 by residue)
QMean score : 0.503
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