Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRSLLILDRDGVINLD-SDDYIKTLDEWIPIPSSIEAIARLSQAGWTVAVATNQSGIARGYYDLAVLEAMHARLRELVAEQGGEVGLIVYCPHGPDDGCDCRKPKPGMLRQIGEHYGVDLSGIWFVGDSIGDLEAARAVDCQPVLVKTGKGVRTLGKPLPEGTLIFDDLAAVASALLQ
2FPX Chain:A ((14-152))
--QKYLFIDRDGTLISEP-DFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYL----MDRANSYVIGDRATDIQLAENMGINGLRYDRETLNWPMIGEQLT-----------------
General information:
TITO was launched using:
RESULT:
Template:
2FPX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80118 for 967 contacts (-82.9/contact) +
2D Compatibility (PS) -15214 + (NN) -15461 + (LL) 924
1D Compatibility (HY) -9200 + (ID) 1850
Total energy: -120919.0 ( -125.05 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_2FPX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FPX-query.scw
PDB file :
Tito_Scwrl_2FPX.pdb
: