Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMIEGLEKMLAKGVDNALLRFGLGKGYLDAGDAERAAEHLQRCVEQDPKYSAGWKLLGKARQAAGDLAGARQAWEQGLATAATHGDKQAEKEMTVFLRKLDRART
2KCL Chain:A ((4-82))
--------------EDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQDAKLKAEGLEH
General information:
TITO was launched using:
RESULT:
Template:
2KCL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2693 for 557 contacts (4.8/contact) +
2D Compatibility (PS) -9047 + (NN) -7897 + (LL) 1508
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -17343.0 ( -31.14 by residue)
QMean score : 0.677
(partial model without unconserved sides chains):
PDB file :
Tito_2KCL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KCL-query.scw
PDB file :
Tito_Scwrl_2KCL.pdb
: