Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDRIAAVKTYLLDLQDRICAALEAEDGKARFAEDAWERPAGGGGRTRVIGDGALIEKGGVNFSHVFGDSLPPSASAHRPELAGRGFQALGVSLVIHPENPHVPTSHANVRFFCAEKEGEEPVWWFGGGFDLTPYYAHEEDCVHWHRVARDACAPFGADVYPRYKEWCDRYFHLKHRNEPRGIGGLFFDDLNQWDFDTCFAFIRAIGDAYIDAYLPIVQRRKHTPFDERQREFQAYRRGRYVEFNLVFDRGTLFGLQSGGRTESILMSLPPQVRWGYDWKPEPGSEEARLTEYFLADRDWLAGQP |
| 3E8J Chain:B ((6-306)) | MSLPVEAVKEFLLKLQDDICHAIEAEDEQATFMEDKWTREGGGGGRTRVIANGAVIEKGGVNFSHVYGKG-------------GCNYQAMGVSLVIHPKNPHVPTSHANVRLFVAE--GKEPVWWFGGGFDLTPYYAVEEDCYYFHHVAQELCRPFGADVYERFKAWCDEYFFIPHRNEARGIGGLFFDDLNEWPFEKCFAFMQAVGKGFIDAYIPIVNRRKNTPYTEQQVEFQEFRRGRYAEFNLVIDRGTKFGLQSGGRTESILMSLPPRARWGYNWHPEPGTPEARLTEYFLTKKQWV---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E8J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125160 for 2353 contacts (-53.2/contact) +
2D Compatibility (PS) -30593 + (NN) -14125 + (LL) 676
1D Compatibility (HY) -36400 + (ID) 10150
Total energy: -215752.0 ( -91.69 by residue)
QMean score : 0.467
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