Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTFARLAAGLCICAIASQANAWSQPTHKNIVKDALAFMNSSYATEEMRQAYRFYVSAAGSEAQAGEILGQAAFDVDDFKDTRLGGWWVGYEHAPLWGAASGIVNYTSYWHFLNLARDGDSHGNPHGGYDYRYHKVDGGIADVDWYAMVYLYNRELKREDFDTTEAHYRQGTRSDWQEHYGDFQTAAFQPIDNLATYWFEQFRAAPSLQTIGYALHATGDVAQPHHVW-------------ITS-ANGHSSWEGWVDDHYASEK-LNDPAAVA-NLVGRYDP-------------------SKSIRDLLTQTGQ----VAYARP------EPLYDTSYE-TRLRVAKELIPESIALTVTVLTKGANSFDAPTAL |
| 1AK0 Chain:A ((107-264)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HAEALRFLVHFIGDMTQPLHDEAYAVGGNKINVTFDGYHDNLHSDWDTYMPQKLIGGHALSDAESWAKTLVQNIESGNYTAQAIGWIKGDNISEPITTATRWASDANALVCTVVMPHGAAALQTGDL-YPTYYDSVIDTIELQIAKGGYRLANWINEIH--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AK0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17541 for 656 contacts (-26.7/contact) +
2D Compatibility (PS) -11405 + (NN) -1097 + (LL) 13352
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -22041.0 ( -33.60 by residue)
QMean score : 0.131
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