Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFMKKLMLAVGLFAVAGSAFAAKPCEELKAEIDAKIKANGVP--------AYTLEIVDKGSVTDKKVVGTCDGGTKEIVYQRG
2WY3 Chain:B ((77-125))
-----------------------------SDITTNILQDGLKMRTVPVTKLYTSRMVTNLTV-GRYDCLRCENGTTKIIERLY
General information:
TITO was launched using:
RESULT:
Template:
2WY3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2991 for 162 contacts (18.5/contact) +
2D Compatibility (PS) -4073 + (NN) 1513 + (LL) 3032
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -687.0 ( -4.24 by residue)
QMean score : 0.149
(partial model without unconserved sides chains):
PDB file :
Tito_2WY3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WY3-query.scw
PDB file :
Tito_Scwrl_2WY3.pdb
: