Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHIQSSQQNPSFVAELSQAVAGRLGQVEARQVATPREAQQLAQRQEAPKGEGLLSRLGAALARPFVAIIEWLGKLLGSRAHAATQAPLSRQDAPPAASLSAAEIKQMMLQKALPLTLGGLGKASELATLTAERLAKDHTRLASGDGALRSLATALVGIRDGSRIEASRTQAARLLEQSVGGIALQQWGTAGGAASQHVLSASPEQLREIAVQLHAVMDKVALLRHAVESEVKGEPVDKALADGLVEHFGLEAEQYLGEHPDGPYSDAEVMALGLYTNGEYQHLNRSL-------RQGRELDAGQALIDRGMS--------AAFEKSGPAE------QVVKTFRGTQGRDAFEAVKEGQVGHDAGYLSTSRDPGVARSFAGQGT---ITTLFGRSGIDVSEISIEGDEQEILYDKGTDMRV--LLSAKDGQGVTRRVLEEATLGERSGHGEGLLDALDLATGTDRSGKPQEQDLRLRMRGLDLA |
| 2WN4 Chain:A ((246-418)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELADVNDYMRGGYTAINNYLISNGPVNNPNPELDSKITNIENALKREPIPTNLTVYRRSGPQEFGLTLTSPEYDFNKLENIDAFKSKWEGQALSYPNFISTSIGSVNMSAFAKRKIVLRITIPKGSPGAYLSAIPGYAGEYEVLLNHGSKFKINKIDSYKDGT-ITKLIV-DATLIP--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WN4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2535 for 970 contacts (2.6/contact) +
2D Compatibility (PS) -15840 + (NN) -5305 + (LL) 21024
1D Compatibility (HY) -6000 + (ID) 2200
Total energy: -5786.0 ( -5.96 by residue)
QMean score : 0.269
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