Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKATYSMLSQVTFPLAEAG-YYVVPVALADETFRQNGLTSAGDVHQVSPAKLREIYGADAALYVTVSDYGTRYMVISSATIVTASAKLVDLRSGTTLWTGSATASSEEGNGGNNGGLVGMLITAAVKQIINSSVEDAGYPIAGMTSARLLSAGQPGGLLYGPRSPRYGSD |
3LY7 Chain:A ((223-296)) | ------VGDLVATSLNTFSTFMVHDKINYNI---------------DEPSSSGKTLSIAFVNQ--RQY---------RAQQCFMSIKLVDNADGSTMLDKRYVITN---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25811 for 361 contacts (-71.5/contact) +
2D Compatibility (PS) -7677 + (NN) -185 + (LL) 3708
1D Compatibility (HY) 400 + (ID) 600
Total energy: -30165.0 ( -83.56 by residue)
QMean score : -0.005
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