Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRYARHASRYSLFTLAVSAALLPGAGWAANGDLAGARKPPSVACSWNREAALSYEERRLDTPLPFSGANVVTHDQTPLAERIVKGAGFDGFEPAFAKRLCAADGRTPVTSYAKALKLVTEEGRALWRAAVDRAQGRRAIPAGALPASDDRMLYWTRLYMTRTLRQWAPSFHLGKAQAQALQWRFERASRGQLDIDLPRRYAADGSRYRRMIISGFDVFTLGTPGTANTGLRNGNPSGATALALDGREFRLADGSLLRIEAYLLPVSYDPFNRGMQEDTLGPWFRPGPRRVDASITISQ-GGANQFWLEAWNGRFHGS-SAGNDGIVYCPADSALPNYVLPLGSVTNPGTAPISLRGSGCNINPPRRWLGYDSASRWRQNLPAQFSKASLPVRQLLAADTWRGIERPPGATSQAAEGFDVTWHTNYDFFPDCANPRTENVPTNGVMNAMPDPSLVLPPNRRICARNGGGGDYLSNESAYRNTVLRDAFRLEIPAGHIHVPVMNNYYTGV--PASGGGARNDNAISDARYEAYRSAIVAQTRALLVGVGNALAQGAQAD |
3LAC Chain:A ((2-202)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTVLLTGFDPFGGE----------SINPAWEVAKSLHEKTIG---E--YKIISKQVPTVFHKSIS-VLKEY----IEE--LAPEFIICIGQAGGRPDITIERVAINIDDARIADNEGNQPVDV--------------------PVV-------------------------EEGPAAYWSTLPMKAIVKKLQ------------------------------------EEGIP---------------------ASVSQTAGTFVCNHLFYGLMHELEKHDTKMKGGFIHIPFLPEQASNYPGQPS----------------MSLSTIRKGIELAVEVTTTVE------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LAC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69582 for 1658 contacts (-42.0/contact) +
2D Compatibility (PS) -20888 + (NN) -4875 + (LL) 17676
1D Compatibility (HY) -4400 + (ID) 1700
Total energy: -83769.0 ( -50.52 by residue)
QMean score : 0.314
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