Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSPAITRKRFIAGAVCPACSEQDKIQMWEEDGVPHRECVACGYADTLNAQGQSIPKELGTRVNQNAPKPANPKVQSVQFFPNPKLKKKPDA
2HF1 Chain:A ((2-39))
------DAKFLEILVCPLCKGP--L--VFDKSKDELICKGDRLAFPIKDGIPMMLESEARELAPEEEVKLE--------------------
General information:
TITO was launched using:
RESULT:
Template:
2HF1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6704 for 183 contacts (-36.6/contact) +
2D Compatibility (PS) -3968 + (NN) -111 + (LL) 1548
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -12385.0 ( -67.68 by residue)
QMean score : -0.007
(partial model without unconserved sides chains):
PDB file :
Tito_2HF1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HF1-query.scw
PDB file :
Tito_Scwrl_2HF1.pdb
: