Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVDGFVQPVGEGLADQLVGHQVGYGGVQWDQCLAEVGDVAVVHFFHQAVRQVGFVEQGVEAVVAGEQRRRGEEELLGDLQHRLDPFLDAGFAGHAVGGVEQVRYLFDVGVDEAGEYVFRVLALRLDGAMQVGQAAGYQISQVTVAGFAEVRLLDEFTEGSGVHGVSHTTGMVKKRRNIAGGARRLRRDCHNRFVVMRG |
| 2JYS Chain:A ((14-30)) | -----------------------------------------------------------------------------------------------IKGT-KLKAHWDSGATITCVPEAFLEDERPIQTMLIKTIHGEKQQDVYYLTFKVQGRKVEAEVLASPYDYILLNPSDVPWLMKKPL----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JYS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3225 for 41 contacts (-78.7/contact) +
2D Compatibility (PS) -1918 + (NN) -1162 + (LL) 8180
1D Compatibility (HY) 800 + (ID) 150
Total energy: 2525.0 ( 61.59 by residue)
QMean score : -0.134
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