Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSDAKVDTRRLVGRLLLVTVLMFAFGFALVPLYDVMCRALGINGKTAGSAYSGEQQVDVGREVKVQFMTSNNIDMVWEFRSAGDQLVVHPGAVNQMVFYARNPSDKPMTAQAIPSIAPAEAAAYFHKTECFC--FTQQVLQPGESIEMPVRFIVDRDLPKDVRHVTLAYTLFDITARKPPVPVAGR |
3QIS Chain:A ((41-107)) | --------------------------------------------------------------------------------------NVKFRQLQKEKFQISNNGQVPCHFSFIPKLN---DSQYCK--PWLRAEPFEGYLEPNETVDISLDVYVSKDSVTILNSGEDKIEDILVLHLDRGKDYFLT |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3QIS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -23368 for 330 contacts (-70.8/contact) +
2D Compatibility (PS) -6826 + (NN) -807 + (LL) 6872
1D Compatibility (HY) -4400 + (ID) 600
Total energy: -29129.0 ( -88.27 by residue)
QMean score : 0.137
|
|
|