Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLAIPMPERPRRARGRLQLLAIIGLVVGPMLLASAMYKWNFWVPQGRSYSGALIGNGQTPADLGVQGR--------SQGEQWQLLVTAPGTCGEDCQQLVYLARQINIALGREASRAGHALAAS-GE------LPADFANL-VRQDYPRLQRYG-----LDP-ALYDK-A----------G--GGERPLLWVVDPHGNLVLRYDAKANGKKLLKDVQLLLKLSHIG |
2GS3 Chain:A ((19-185)) | --------------------------------------------------YFQSMRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQGG-KTEVNYTQLVDLHARYAE--CGLRILAFPCNQFGKQEPGSNEE-IKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHYF------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GS3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36364 for 914 contacts (-39.8/contact) +
2D Compatibility (PS) -14298 + (NN) -7991 + (LL) 4828
1D Compatibility (HY) 0 + (ID) 550
Total energy: -54375.0 ( -59.49 by residue)
QMean score : 0.451
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