Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQRKAVLVMGAGDATGGAIARRFAREGYVACVARRNAE-KLEPLVQAIRDQGGEALACGCDARQEQQVIDLFARIEGEVGALEAVIFNVGANVWFPITETTERVYRKVWEMAAFGGFLTGREAARVMLPRQ-RGTIIFTGATASLRGRAHFAAFSGAKFALRALAQSMARELGPKDIHVAHPIIDGAIDTDFIRETLPELYKRKEQDGIL------DPEHIAETYWQIHCQPRDCWVHELDLRPWMETF
1RWB Chain:A ((8-225))
----KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPKGIRVNN-IGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTL
General information:
TITO was launched using:
RESULT:
Template:
1RWB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131592 for 1755 contacts (-75.0/contact) +
2D Compatibility (PS) -22572 + (NN) -8335 + (LL) 340
1D Compatibility (HY) -10000 + (ID) 3000
Total energy: -175159.0 ( -99.81 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_1RWB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RWB-query.scw
PDB file :
Tito_Scwrl_1RWB.pdb
: