Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAYAEWIAVKVVVSKSIGTVGIRNATLQWGKFYRYTNKDDEISTEEVSSMNVQAGSPQWIASCGRENASSGTQGSF-----DCYDGNTKMGTFSWDD------PWKSGATNTWSFTPASADYAGITSGGNATGTD-IGEVTLTLGRFS |
4CUC Chain:A ((496-582)) | ---------------------------------------------------LRAKHPKWLIYGSQTSSATRTRGSYYRPERELKHSNGPERNYEQSDYGNDRVGWGKTATASWTFDRDNAGYAGQFIW---TGTDYIGEPTPWHNQNQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14749 for 364 contacts (40.5/contact) +
2D Compatibility (PS) -8112 + (NN) -3692 + (LL) 3900
1D Compatibility (HY) -2000 + (ID) 1250
Total energy: 3595.0 ( 9.88 by residue)
QMean score : 0.019
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