Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDAVPAGNFVPPLILHSDHGGSAMSSSAHRGRILHFLGDPAKLGDKAWEYFEDGLLWIEHGHVRALDHATYLLPQLPADLPLEEHPQRLLLPGFVDCHVHYPQL---GVIASYGTQLLDWLETHTFPAEQRFAD--AGYAAAQAELFLDELLRHGTTTALVFGTVHAVSAEAFF-QAAQKRRLRMIAGKVLMDRNAPPALCDTAASGYAESRALIERWHG-NGRLQYAVTPRFAPTSSPEQLAAAARLLDEYPGVY--LHTHLSENLKEVAWVGELFPQAQDYLDVYHRAGLVGERSVFAHGIHLSERECRCLAHKNAALAHCPSSNLFIGSGLFDLGRAQQYGIRVGIGSD-VGGGTSLSLLANLADAYKIQQLRG-TSLDPFQALYLATLGGARALDLDGLVGNFLPGREADFVALDLAATPMIAQRMEHARGLADTLFVLNTLGDDRAVAETWVMGERRHVKG |
| 1P1M Chain:A ((2-351)) | ------------------------------------IIGNCLILKDFSSEPFW-GAVEIENGTIKRV-----LQGEVKVDLDL---SGKLVMPALFNTHTHAPMTLLRGVAEDLSFE--EWLFSKVLPIEDRLTEKMAYYGTILAQM---EMARHG-----IAGFVDMYFHEEWIAKAVRDFGMRALLTRGLVDSNGDDG------GRLEENLKLYNEWNGFEGRIFVGFGPHSPYLCSEEYLK---RVFDTAKSLNAPVTIHLYETSKEEY-------DLEDILNI----GLKEVKTIAAHCVHLPERYFGVLKDIPFFVSHNPASNLKLGNGIAPVQRMIEHGMKVTLGTDGAASNNSLNLFFEMRLASLLQKAQNPRNLDVNTCLKMVTYDGAQAMGFKS--GKIEEGWNADLVVIDLDLPEMFPVQNIKNHLVHAFSGEVFATMVAGKWIYFDGEYPTIDSEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178454 for 2959 contacts (-60.3/contact) +
2D Compatibility (PS) -36481 + (NN) -16431 + (LL) 4876
1D Compatibility (HY) -21200 + (ID) 5000
Total energy: -252690.0 ( -85.40 by residue)
QMean score : 0.408
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