Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MLLSLEPRGRQSRWMLLASPLLAGLLTLVCGALLFACLGHDPWQTLHTVLVQPLSDLYGLGELLVKAMPILLCALG--------LALA----------YQA--RVWNIGAE--GQLLVGALAGSAVAIQLLDWQSRWALAWVLLAGTAAGALWAGFAAWLRTRFNANEIL------TTIMLNYIALNLLLYGVHGPLKDP-------DGFNFPQSALFGEASRLPALFE-DSRVHLGALFGLLALAAVWVLAQRSFLGFQVRVLGLDRRAAGFVGFREK-RLVWFVLLFSGALAGLAGVCEVAGPIGQLVPQVSPGYGYAAITVAFLGRLNP---FGILCASLLMA--------LLYLGGEAAQMSLNLPLALSGLFQGMMLFFLLACDVLILYRP--RLHGRWRKRPALRDALA |
| 4N0N Chain:A ((22-422)) | SAVCTVCGAAPVAKSACGGWFCGNCVPYHAGHCHTTSLFANCGHDIMYRSTYCTMCEGSPKQMVPKVPHPILDHLLCHIDYGSKEELTLVVADGRTTSPPGRYKVGHKVVAVVADVGGNIVFGCGPGSHIAVPLQD-TLKGVVVNKALKNAAASEYVEGPPGSGKTFHLVKDVLAVVGSATLVVPTHASMLDCINKLKQAGADPYFVVPKYTVLDFPRPGSGNITVRLPQVGTSEGETFVDEVAYFSPVDLARILTQGRVKGYG------DLNQLGCVGPASVPRNLWLRHFVS--LEPLRVCHRFGAAVCDLIKGIYPYYEPAPHTTKVVFVPNPDFEKGVVITAYHKDRGLGHRTIDSIQGCTFPVVTLRLPTPQSLTRPRAVVAVTRASQELYIYDPFDQLSGLLKF--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N0N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -312444 for 2703 contacts (-115.6/contact) +
2D Compatibility (PS) -35110 + (NN) 5495 + (LL) 1560
1D Compatibility (HY) -9200 + (ID) 3400
Total energy: -353099.0 ( -130.63 by residue)
QMean score : 0.078
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