Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPADGE-AARRADLLKAFLAQRQRMESLVSRWVGCRATAADLVQELFLRFWRRPAA--P-VEELGSYLLRSARNLAIDHLRGEGSRQRQLDDWLPEQRQGEPVGPEQALEAGDQWRRVEAALRGLPERTRRIFLLNRIHGRTYAEIAQAMQLSQSAVEKHMMRALDACKASLAGPAGEQARSAQP
2Q1Z Chain:A ((19-183))
---AIRDHRDEAAFAELFQHFAPKVKGFLMKSGSVASQAEECAQDVMATVWQKAHLFDPSRASVATWIFTIARNRRIDGLRKDRQPEPEDLFWGP----DSEPDQADVYEMQQENARLGRAIARLPEAQRALIERAFFGDLTHRELAAETGLPLGTIKSRIRLALDRLRQHM-------------
General information:
TITO was launched using:
RESULT:
Template:
2Q1Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33512 for 996 contacts (-33.6/contact) +
2D Compatibility (PS) -17752 + (NN) -12661 + (LL) 1024
1D Compatibility (HY) -6000 + (ID) 1450
Total energy: -70351.0 ( -70.63 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_2Q1Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q1Z-query.scw
PDB file :
Tito_Scwrl_2Q1Z.pdb
: