Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHQRIASIGLGLTLALGGSAQAAGQLNVV-------SWSGYFSPQLLEKFEKESGIRV-TVDSYDSNETLLAKLKQGGAGYDVAIPSQQFVPILVKEALLE----RFDPAAEPYYANLLDNLKKPAWDPEGAYSVPFIWGTTSVVLDGARYAGPADSYAVLYQPPEELRGRINMFDSVSEVVDMASLYLGIPLCSADPKQMQRVLELLKAQKPFVKTYSSKAGSIRENLAAGEVDMSMFWGGSSMRARELKPSLKYLYPKEGVLAWVDNLVIPRGSRNPDNARRFIAFLAQPENAA-LTQNFLKHQSPVKGVEPYLDASLKDAPELHVPAGTRVVFSQTCGEDAIRLADRLWTNLMR |
| 3RPW Chain:A ((31-300)) | ------------------------QSNVVIMQDPGGGYGDALRKVMYDPFEKETGIKVVTVQEARSGPRIKAQAEAGKAQWDLTFIFDQETKLLGDCCLADIDYSKLSESAHKTLAAMPDNLKRKKGVALQVIGVGLVYNKDKFKGDKAPQTW-ADFWDVKKFPGRRCMPAWPRF-----TFEAALMADGVTKDKLYPIDMDRALKKLKEIKPHVVKWWTTAAQPPQLILDGEADMCLAYTGSMSKL-ALEGAPIDLTFNQGFV-YYDFFSIPKGAPNYDNALKLLSWRLDPKRAAQLTSTFPVALPSKVVFDAATDKNIARYWANNPENVAKAIEWSPDFWGAPSPAGNSTNEEYG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RPW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54929 for 1967 contacts (-27.9/contact) +
2D Compatibility (PS) -27347 + (NN) -9853 + (LL) 1828
1D Compatibility (HY) -8400 + (ID) 3500
Total energy: -102201.0 ( -51.96 by residue)
QMean score : 0.417
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