Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMN---ASTSPLPASDQTLRGILLICAAV--FLFASHDGLSKFL---SGFYPIVMVVWARYLVHTLLMVAVFVPRNGLAVIRSRRPL------MQLARALCLIGTSLFFTTGLRYLPLAE-------------------ATAVNFLAPLLVTALSVPLLKEKVSLGQWLAVLTGFIGVLFIVRPGGALF---------------TPAA---LFPLGSALC---FGLYQLLTRM-----LANSDS-----------PTTSNFLAGIFNTLIMSLLVPFFWQTPSLLHGLMMIALGGCGMGGHLLLTQAFRHAPPATLAPFSYGQIIFAGLLGLLVFGHVPDAWALLGILVICASGLVVAWRR--------GR----------------------------------------
4KNC Chain:A ((15-437))GNLCPAAAYDSRYNTKYLGFFTHLVQAQDDWLFRTTYDLRTDFGTSAEGWRELRALRDELKRKGIELVVVYQPTRGLVNREKLSPAEKAGFDYELAKKNYLATIARFRQAGIWTPDFSPLFDEKEEHAYYFKGDHHWTPHGARRSAKIVAETLKQVPGFEEIPKKQFESKRVGLLSKLGTFHKAAAQLCGNSYATQYVDRFETEPVGNPQIALVGTSNSGPAYNFAGFLEEFSGADILNNAVSGGGFDSSLLAYMTSEEFHKNPPKILIWEFATHYDMAQKSFYRQAMPLVDNGCSGRKTVLSRKVKLRQGRNEVLLNSAALPIRSGSYVADVTYSDPSVHELKNTIWYMNGRREQLKIEQSKAVDTGGRYVFQLRNDSDWADQQFLSLEIEAPDMPQGLEVQASICQAA


General information:
TITO was launched using:
RESULT:

Template: 4KNC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -261224 for 1916 contacts (-136.3/contact) +
2D Compatibility (PS) -30737 + (NN) -8634 + (LL) 0
1D Compatibility (HY) 1600 + (ID) 2400
Total energy: -301395.0 ( -157.30 by residue)
QMean score : 0.096

(partial model without unconserved sides chains):
PDB file : Tito_4KNC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KNC-query.scw
PDB file : Tito_Scwrl_4KNC.pdb: