Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHPSHVRALCASLCLGAGLPVHAGHVHAGQGFLEDAKASLTARNFHLHRNFVGDASQGKAEEWTQSFILDARSGFTQGSVGFGLDVLGLYSLKLDGGKGTAGTQLLPIHDDGRPADDFGRLAVAGKLRVSNSELKIGEWMPVLPILRSDDGRSLPQTFRGGQLSANEIAGLTLYAGQFRGNSPRNDASMQDMSLFGRP-----AATSDRFDFAGGEYRFNGERSLLGLWN-AELKDIYRQQYLQLQHSQPLGDWLLGANLGGFRGRDAGSARAGKLDNRTVSALFSARY-GLHTLYLGLQKVSGDDGWMRVNGTSGGTLANDSYNASYDNPGERSWQLRYDFDFVGLGLPGLTFMTRYLHGDHVRLAGVTDDGSEWGRESELGYTLQSGAFKRLNVRWRNSSQRRDWGSNTRFDENRLIVSYPLSLL |
| 4FSP Chain:A ((17-408)) | ------------------------------EGFLEDSRASLALRNFYMNRDFR------KSEEWAQGFLFDYRSGYTEGTLGVGLDLLGKLGVRLD----------------------YARLDATAKLRLSRSELKVGGLVPKLPTIQPNYGRLFPQVFQGALLTSGELSGLSLNLGRLTEVS-------SDLALFNRNRRFAGAAQADRFDLAGLDYRIAPDWT--GSYHYGELEQVYAQHFLGLKGRIGIAADSLESDLRLALSRDTGGARGGRIDNRSFSGSLTYRLRNGQAFGLGYQRMSGDHGFPYLEGTDPYLVNFGQYN-DFAEAGESSWQLRYDCDFAPLGVPGLSLMTRYFSGHGAKPKGA-DGSREWERDSDLRYVLQGGALKGLGLVWRNATYRSAFSRD--IDENRLYLTYELPLF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FSP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12876 for 2742 contacts (4.7/contact) +
2D Compatibility (PS) -35820 + (NN) -2361 + (LL) 2064
1D Compatibility (HY) -30800 + (ID) 7600
Total energy: -61641.0 ( -22.48 by residue)
QMean score : ?
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