Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQPFAIAPSILSADFARLGEDVDKVLAAGADIVHFDVMDNHYVPNLTIGPMVCSALRKY-GVSAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEASQHIDRSLQLIRDGGCKAGLVFNPATPLEVLKYVMDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGREIRLEIDGGVNVKNIREIAAAGADTFVAGSAIFNAPDYAEVIRAMHAELAQAHQ
3QC3 Chain:A ((8-223))
-----IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPS----LDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQ
General information:
TITO was launched using:
RESULT:
Template:
3QC3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -192190 for 1808 contacts (-106.3/contact) +
2D Compatibility (PS) -23720 + (NN) -11646 + (LL) 468
1D Compatibility (HY) -20000 + (ID) 4300
Total energy: -251388.0 ( -139.04 by residue)
QMean score : 0.719
(partial model without unconserved sides chains):
PDB file :
Tito_3QC3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QC3-query.scw
PDB file :
Tito_Scwrl_3QC3.pdb
: