Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKLCNVVVLISGSGSNLQALIDSLRDGATPARIRAVISNRADAYGLERARQAGIQTEVLDHKAYADRESFDEALAQRIDAHEPHLVILAGFMRILSADFVRHYQGRLLNIHPSLLPRHKGLHTHQRALEAGDREHGCSVHFVTEELDGGPLVVQAVIPVESQDTPERLARRVHEEEHRIYPLAMRWFAEGRLRLGEQGALLDGQALPATGHQIRTKEIRNA
1MEO Chain:A ((3-197))
------VAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAE---AGQIILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVASGTVQLGENGKICWVKEEHH-------------
General information:
TITO was launched using:
RESULT:
Template:
1MEO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149987 for 1517 contacts (-98.9/contact) +
2D Compatibility (PS) -21771 + (NN) -15429 + (LL) 1108
1D Compatibility (HY) -19200 + (ID) 4750
Total energy: -210029.0 ( -138.45 by residue)
QMean score : 0.639
(partial model without unconserved sides chains):
PDB file :
Tito_1MEO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MEO-query.scw
PDB file :
Tito_Scwrl_1MEO.pdb
: