Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSELILLHNPRCSKSRAALELLEARGLQPQVVRYLETPP-SAAELKAILAKLGIPARQLLRTGEDEYKALGLDEPSLGEEAIIEAMARHPKLIERPVLVAGDKAVVGRPPERVLEILA
3GFK Chain:A ((2-104))
---VTLYTSPSCTSCRKARAWLEEHEI-PFVERNIFSEPLSIDEIKQILRMTEDGTDEIISTRSKVFQKLNVNVESMPLQDLYRLINEHPGLLRRPIIIDEKRLQVGYNEDEIRRFLP
General information:
TITO was launched using:
RESULT:
Template:
3GFK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56752 for 671 contacts (-84.6/contact) +
2D Compatibility (PS) -11772 + (NN) -10773 + (LL) 404
1D Compatibility (HY) -8000 + (ID) 1300
Total energy: -88193.0 ( -131.44 by residue)
QMean score : 0.687
(partial model without unconserved sides chains):
PDB file :
Tito_3GFK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GFK-query.scw
PDB file :
Tito_Scwrl_3GFK.pdb
: