Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRPILEVSGLTMRFGGLLAVNGVNLKVEEKQVVSMIGPNGAGKTTVFNCLTGFYQPTGGLIRLDGEEIQGLPGHKIARKGVVRTFQNVRLFKEMTAVENLL-VAQHRHLNTNFLAGLFKTPAFRRSEREAMEYAAHWLEEVNLTEFANRSAGTLAYGQQRRLEIARCMMTRPRILMLDEPAAGLNPKETDDLKALIAKLRSEHNVTVLLIEHDMKLVMSISDHIVVINQGAPLADGTPEQIRDNPDVIKAYLGEA
4P32 Chain:A ((3-234))
-----LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD----------DLSAEQREDR-----ANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLR-DSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEHVKRVYL---
General information:
TITO was launched using:
RESULT:
Template:
4P32.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148199 for 1902 contacts (-77.9/contact) +
2D Compatibility (PS) -25054 + (NN) -8041 + (LL) 1700
1D Compatibility (HY) -16800 + (ID) 3800
Total energy: -200194.0 ( -105.25 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_4P32.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4P32-query.scw
PDB file :
Tito_Scwrl_4P32.pdb
: