Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKALKTLFIATALLGSAAGVQAADNFVGLTWGETSNNIQKSKSLNRNLNSPNLDKVIDNTGTWGIRAGQQ-FEQGRYYATYENISDTS-SGNKLRQQNLLGSYDAFLPIGDNNTKLFGGATLGLVKLEQDGKGFKRDSDVGYAAGLQAGILQELSKNASIEGGYRYLRTNASTEMTPHGGNKLGSLDLHSSSQFYLGANYKF |
1P4T Chain:A ((3-155)) | ---------------------ASGFYVQADAAHAKASSSL---------------GSAKGFSPRISAGYRIND-LRFAVDYTRYKNYKAPSTDFKLYSIGASAIYDFDTQ-SPVKPYLGARLSLNRASVDLGGSDSFSQTSIGLGVLTGVSYAVTPNVDLDAGYRYNYIGKVNT----------VKNV-RSGELSAGVRVKF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 48401 for 1133 contacts (42.7/contact) +
2D Compatibility (PS) -15190 + (NN) 547 + (LL) 2172
1D Compatibility (HY) -400 + (ID) 1350
Total energy: 34180.0 ( 30.17 by residue)
QMean score : 0.096
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