Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKHIIARTPARSLVD-GLTSSHLGKPDYAKALEQHNAYIRALQT-CDVDITLLPPDERFPDSVFVEDPVLCTSRCAIITRPGAESRRGETEIIEETVQRFYPGKVERIEAPGTVEAGDIMMVGDHFYIGESARTNAEGARQMIAILEKHGLSGSVVRLEKVLHLKTGLAYLEHNNLLAAG---------EFVSKPEFQDFNIIEIPEEESYAANCIWVN----ERVIM---PAGYPRTREKIARL-GYRVIEVDTSEYRKIDGGVSCMSLRF |
| 3P8P Chain:A ((38-300)) | ---HAVVRALPESLGQHALRSAKGEEVDVARAERQHQLYVGVLGSKLGLQVVELPADESLPDCVFVEDVAVVCEETALITRPGAPSRRKEVDMMKEALEKLQLNIVEMKDENATLDGGDVLFTGREFFVGLSKRTNQRGAEILADTFKDYAV--STVPVADGLHLKS-FCSMAGPNLIAIGSSESAQKALKIMQQMSDHRYDKLTVPDD--IAANCIYLNIPNKGHVLLHRTPEEYPESAKVYEKLKDHMLIPVSMSELEKVDGLLTSCSVLI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3P8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -132868 for 2068 contacts (-64.2/contact) +
2D Compatibility (PS) -26309 + (NN) -7279 + (LL) 108
1D Compatibility (HY) -18800 + (ID) 4000
Total energy: -189148.0 ( -91.46 by residue)
QMean score : 0.632
|
|
|