Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSQINRQYQLAQRP--SGLPGRDTFSFVETPLGEPA-EGQILVKNEYLSLDPAMRGWMND--ARSYIPPVGIGEVMRALGVGKVLVSKHPGFQAGDYVNGALG-VQDYFIGEPKGFYKVDPS--RAPLPRYLSALGMTGMTAYFALLDVGQPKNG--ETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRAR---MEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV |
| 2ZB8 Chain:A ((14-351)) | ----------LNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDT----ITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZB8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194868 for 2732 contacts (-71.3/contact) +
2D Compatibility (PS) -34714 + (NN) -17198 + (LL) 1216
1D Compatibility (HY) -30000 + (ID) 6450
Total energy: -282014.0 ( -103.23 by residue)
QMean score : 0.496
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