Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTDSPLRTTASTCCYCGVGCGVLIEHDGERILGVQGDPRHP--ANFGRLCSKGASLHLTGDLQARALYPQLRLGKQLA-----RARSDWESALEHAAGRFAETIREHGPDSV---AFYISGQLL-TEDYYAFNKLARALVGTNNIDSNSRLCMSSAVVGYKRSLGADAPPCSYEDLDCADCVLIAGSNMAFAHPVLF----------RRLEAAKAARPEM-----RIVVIDPRRTDT---CEL---AD--LHLALLPGTDVALFHGILHILLWEDWIDRSFIAE------------------------HTEGFADLKELVRDYTPAAVADICGIDRADLQRCAEWI------GRSPRFLSLWCMGLNQSSAGSAKNSALINLHLATGKIGRAGCGPFSLTGQ-------PNAMGGRETGSLANLLPGHREAADPGHRAEVAHYWGVEQLPTSPGLSAIELFDAVHDGRIKALWIACTNPAQSLPDQ----RKIHEALARCPFVVVQEAFAGTETCQYADLLLPAASWGEKEGSVTNSERRISHVRRAVPPPGEARQDWNIVCDFARRLEGHLRPAKPGLFAFADSRSLFD---EYKLLTAGRDLDLSGLSYALLDRLGPQ-----QWP---FPTGAEQGTARLYADGRFPTASGRAQLVAEPYR-----AAQEKRDARYPLTLNTGRLRDQWHGMSRTGTCARLFGHEEEALVHLHPEELRRRQLLDGQLVRLKSRRGALVLPVSADDSVRPGQAFLPMHWGDRFLKGLGCNVLTLPAFDPLSKQPELKHAGVQVESVELPWRLFALVETDIQARFEALRALCEVFDHASFSLAGRERPALLVSAAHHEAPGADLLERIDRQLELLDGPILAYDDPRRAIGKRVRLEDGRIVAVRLAGETLARDWLKELWLTGRADSELRRWLLAPLGAAPGRPSQGAGGKTLCSCQNVSQQTVLGGIARGLDLDGLKREFGCGTGCGSCVPEIKRLLAAPRPMAANA |
| 4AAY Chain:A ((76-790)) | -----------------------VVKQDG-RDVHVVIKPDHECVVNSGLGSVRGARMAETSFSEARNTQQQ-RLTDPLVWRYGQMQPTSWDDALDLVARVTAKIVKEKGEDALIVSAFDHGGAGGGYENTWGTGKLYFEAMKVKNIRIHNRPAYNSEVHG-TRDMGVGELNNCYEDAELADTIVAVGTNALETQTNYFLNHWIPNLRGESLGKKKELMPEEPHEAGRIIIVDPRRTVTVNACEQTAGADNVLHLAINSGTDLALFNALFTYIADKGWVDRDFIDKSTLREGTARPPLYPARGVSEANPGHLSSFEDAVEGCRMSIEEA-AEITGLDAAQIIKAAEWIGMPKEGGKRRRVMFGYEKGLIWGNDNYRTNGALVNLALATGNIGRPGGGVVRLGGHQEGYVRPSDAHVGRPAAYVDQLL--------IGGQGGVHHIWGCDHYKTT--LNAHE-FKRVYKKRTDMVKDAMS--AAPYGDREAMVNAIVDAINQGGLFAVNVDIIPTKIGEACHVILPAATSGEMNLTSMNGERRMRLTERYMDPPGQSMPDCLIAARLANTMERVL--TEMGDVGYAAQFKGFDWQTEEDAFMDGYNKNAHGGEFVTYERLSAMGTNGFQEPATGFTDGKIEGTQRLYTDGVFSTDDGKARFMDAPWRGLQAPGKQQQKDSHKYL-INNGRANVVWQSAYLDQENDFVMDRFPYPFIEMNPEDMAEAGLKEGDLVEIYNDAGATQAMAYPTPTARRGETFMLFGFPTGVQGNVTSAGTNELIIPNYKQTWGNIRKISDAPRNVAHLSFKSKEYQS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AAY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -223083 for 5279 contacts (-42.3/contact) +
2D Compatibility (PS) -66968 + (NN) -30403 + (LL) 14036
1D Compatibility (HY) -19600 + (ID) 10000
Total energy: -336018.0 ( -63.65 by residue)
QMean score : 0.374
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