Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNAMALTLAGLLAAPSLGFAAAPDAVMVFARQGDKGSVSVGDKHFRTQAFKVRLVNAAKSEISLKNSCLVAQSAAGQSFRLDT---VDEELTADTLKPGASVEGDAIFASEDDAVYGASLVRLSDRCK |
2F1E Chain:A ((6-80)) | -----------------------RYRVEVEVSPRFLAHQSTPDEGRYAFAYSIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVGEQ---PWLRPGEAFHYTSGVLLETEQGQMQGHYDMVADDG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F1E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4696 for 322 contacts (-14.6/contact) +
2D Compatibility (PS) -7571 + (NN) -249 + (LL) 2476
1D Compatibility (HY) 0 + (ID) 800
Total energy: -10840.0 ( -33.66 by residue)
QMean score : 0.283
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