Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWTKPSFTDLRLGFEVTLYFANR
3LOT Chain:A ((256-268))
--------DVRVGLEDSLYIERG
General information:
TITO was launched using:
RESULT:
Template:
3LOT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1458 for 32 contacts (-45.6/contact) +
2D Compatibility (PS) -1166 + (NN) 1595 + (LL) 496
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -2833.0 ( -88.53 by residue)
QMean score : -0.002
(partial model without unconserved sides chains):
PDB file :
Tito_3LOT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LOT-query.scw
PDB file :
Tito_Scwrl_3LOT.pdb
: