Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSVFDRDDIQFQVVVNHEEQYSIWPEYKEIPQGWRAAGKSGLKKDCLAYIEEVWTDMRPLSLRQHMDKAAG
4GR5 Chain:B ((4-73))
MSNPFEEYDGGHVVLTDALGRHSLWPAGIAVPAGWSVRHGTDSREGCLAHIEHHWTDLRP------------
General information:
TITO was launched using:
RESULT:
Template:
4GR5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15627 for 361 contacts (-43.3/contact) +
2D Compatibility (PS) -6382 + (NN) -2737 + (LL) 900
1D Compatibility (HY) -1600 + (ID) 1000
Total energy: -26446.0 ( -73.26 by residue)
QMean score : 0.285
(partial model without unconserved sides chains):
PDB file :
Tito_4GR5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GR5-query.scw
PDB file :
Tito_Scwrl_4GR5.pdb
: