Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSKNTICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGGPAF------RHSEAFSFQVATDDQAETDRLWNAIVDNGGE----------ESACGWCRDKWGISWQITPRVLSEAIASPDRAAARRAFEAMMTMGRIDIATIEKAFKG
1XY7 Chain:A ((35-154))
------------QKVGDAVTFYKSAFGAIES----------------HVLSSELNLAGSSFVVCDVSSLPGFSTAKSEGSGVTFLLGTK---DAEAAVAKAVDAGAVKVEVTEAEVELGFKGKVTDPFGVTWIFAE---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1XY7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34642 for 578 contacts (-59.9/contact) +
2D Compatibility (PS) -9996 + (NN) -6595 + (LL) 4812
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -51321.0 ( -88.79 by residue)
QMean score : 0.287
(partial model without unconserved sides chains):
PDB file :
Tito_1XY7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XY7-query.scw
PDB file :
Tito_Scwrl_1XY7.pdb
: