Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLDVFLDFLLGMVLGCLGGLFGIGGGLLAIPALGVIFGLDQQLAQGTALVMVVPNVVLALWRYHQRNRIDPRQAGVLALTGLLCAFLASSVAARIDAARMREAFVIFLLALAGYMFWRLFRRPPQGGATPRYGLPWMGVLGLGAGSLGGLFGVGGGVLATPVLTSVFGLAQVVAQGLALALAAPSTAVALGTYAMHGHVDWRMGIPLALGGLLSISWGVRLAHALPERSLRMAFCAFLALCAVLLLVRG |
4TNJ Chain:T ((1-32)) | -------------------------------------------------------------------------------------------------METITYVFIFACIIALFFFAIFFREPPRITKK------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TNJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7721 for 112 contacts (-68.9/contact) +
2D Compatibility (PS) -3629 + (NN) -6516 + (LL) 16240
1D Compatibility (HY) -3200 + (ID) 400
Total energy: -5226.0 ( -46.66 by residue)
QMean score : 0.120
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