Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------MRRLKRDPLERAFLRGYQNGITGKSRDLCPFTHPTTRQSWLNGWREGRGDNWDGLTGTAGLQRL-NQLQHV--------------------------------------------------------------------------------------------------------- |
1TFJ Chain:A ((16-219)) | EHLLRPLPADKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPTKFR---TLQNILEVEKEMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKALSKGQNVTEEECLEKVRLFLVNYTATIDVIYEMYTRMNAELNYKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TFJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2873 for 401 contacts (7.2/contact) +
2D Compatibility (PS) -6959 + (NN) -782 + (LL) -44
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -8312.0 ( -20.73 by residue)
QMean score : 0.377
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