Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFNRVVCGKLS--WFIQAGGSMPSLIMDIALSGERLQAIYGGRANRVLLRSRDGRRVNLPAHHLRPFIGHDGVHGTFRLDFSEDGRLLALQRLA
3BMZ Chain:A ((126-172))
----RVVLGREADGWRYQRPGKGPSTLYLDAASGTPLRMVTGDEASRASLR--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3BMZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15106 for 240 contacts (-62.9/contact) +
2D Compatibility (PS) -4541 + (NN) 2631 + (LL) 2532
1D Compatibility (HY) -400 + (ID) 900
Total energy: -15784.0 ( -65.77 by residue)
QMean score : 0.237
(partial model without unconserved sides chains):
PDB file :
Tito_3BMZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BMZ-query.scw
PDB file :
Tito_Scwrl_3BMZ.pdb
: