Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRRHSCKGVGSSVAWSLLGLAISAQSLAGTVTTDGADIVIKTKGGLEVATTDKEFSFKLGGRLQADYGRFDGYYTNNGNTADAAYFRRAYLEFGGTAYRDWKYQINYDLSRNVGNDSAGYFDEASVTYTGFNPVNLKFGRFYTDFGLEKATSSKWVTALERNLTYDIADWVNDNVGTGIQASSVVGGMAFLSGSVFSENNNDTDGDSVKRYNLRGVFAPLHEPGNVVHLGLQYAYRDLEDSAVDTRIRPRMGMRGVSTNGGNDAGSNGNRGLFGGSSAVEGLWKDDSVWGLEGAWALGAFSAQAEYLRRTVKAER-----------------DREDLKASGYYAQLAYTLTGEPRLYKLDGAKFDTIKPENKEIGAWELFYRYDSIKVEDDNIVVDSATREVGDAKGKTHTLGVNWYAN----EAVKVSANYVKAKTDKISNANGDDSGDGLVMRLQYVF |
| 3T24 Chain:A ((254-398)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDNKALNAMFTYSLGYHAFGVGYQKMSGDTGFAYINGADPYLVNFIQIGDFANKDEKSWQARYDYNFAG----------------V---GIPGLTFMTRYVKGDNIDLLTT-------SGEGKEWERDMDIAYVFQSGPLKNLGVKWRNATMRTNY------TNDYDENRLIVSYTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T24.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 30770 for 785 contacts (39.2/contact) +
2D Compatibility (PS) -12624 + (NN) 3275 + (LL) 13448
1D Compatibility (HY) -2000 + (ID) 900
Total energy: 31969.0 ( 40.72 by residue)
QMean score : 0.114
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