Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNDMEDHLLTVLSVASGVPKEEISRD-SRMEDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDELFQLVEKHRAA
1T8K Chain:A ((3-77))
----IEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA-
General information:
TITO was launched using:
RESULT:
Template:
1T8K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33543 for 488 contacts (-68.7/contact) +
2D Compatibility (PS) -7831 + (NN) -5010 + (LL) 56
1D Compatibility (HY) -3200 + (ID) 1150
Total energy: -50678.0 ( -103.85 by residue)
QMean score : 0.664
(partial model without unconserved sides chains):
PDB file :
Tito_1T8K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T8K-query.scw
PDB file :
Tito_Scwrl_1T8K.pdb
: