Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSISISYSTTYSGWTVADYLADWSAYFGDVNHRPGQVVDGSNTGGFNPGPFDGSQYALKSTASDA-AFIAGGDLHYTLFSNPSHTLWGKLDSIALGDTLTGGASSGGYALDSQEVSFSNLGLDSPIAQGRDGTVHKVVYGLMSGDSSALQGQIDALLKAVDPSLSINSTFDQLAAA--GVAHATPAAAAAEVGVVGVQELPHDLALAA
1DKH Chain:A ((3-174))
--FSVNYDSSFGGYSIHDYLGQWASTFGDVNHTNGNVTD-ANSGGFYGGSLSGSQYAISSTANQVTAFVAGGNLTYTLFNEPAHTLYGQLDSLSFGDGLSGGDTSP-YSIQVPDVSFGGLNLSSLQAQGHDGVVHQVVYGLMSGDTGALETALNGILD--DYGLSVNSTFDQVAAATA------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1DKH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98278 for 1341 contacts (-73.3/contact) +
2D Compatibility (PS) -18351 + (NN) -14030 + (LL) 2408
1D Compatibility (HY) -18000 + (ID) 4550
Total energy: -150801.0 ( -112.45 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_1DKH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DKH-query.scw
PDB file :
Tito_Scwrl_1DKH.pdb
: