Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEEAGFGPGRSNMHTGETLAAAPPARPLRQSRLGGLSLFLALAGVAIALAVMALALGERIDLSDENHLLGLFAALLAVFAVSTCGLVLGLAGLLRRSRKRHLALAGIVLNLSCLLWGWHALSTAAAAILMVLGQTGLSFLSALAVLFGMIFFRQA |
| 1PJM Chain:A ((1-20)) | -------------CGKRSAEGSNPPKPLKKLRG-------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PJM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31 for 47 contacts (-0.7/contact) +
2D Compatibility (PS) -2011 + (NN) -1942 + (LL) 12016
1D Compatibility (HY) 400 + (ID) 200
Total energy: 8232.0 ( 175.15 by residue)
QMean score : 0.438
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