Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVILLGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERITEADCAKGFLFDGFPRTIPQAEA----LKDAGVTIDHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKVAGKDDVTGEELIQREDDKEETVRHRLSVYHSQTKPLVDFYQKLSAAEGTPKYHSIAGVGSVEQITAKVLSALS
3BE4 Chain:A ((7-194))
-NLILIGAPGSGKGTQCEFIKKEYGLAHLSTGDMLREAIKNG--IGLEAKSIIESGNFVGDEIVLGLVKEKFDLGVCVNGFVLDGFPRTIPQAEGLAKILSEIGDSLTSVIYFEIDDSEIIERISGRCTHPASGRIYHVKYNPPKQPGIDDVTGEPLVWRDDDNAEAVKVRLDVFHKQTAPLVKFYEDL------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3BE4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54815 for 1311 contacts (-41.8/contact) +
2D Compatibility (PS) -19958 + (NN) -10495 + (LL) 1996
1D Compatibility (HY) -19200 + (ID) 4800
Total energy: -107272.0 ( -81.82 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_3BE4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BE4-query.scw
PDB file :
Tito_Scwrl_3BE4.pdb
: