Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASHELDYRILGESMQTVEIELDPGETVIAEAGAMNYMTGDIRFTARMGDGSDGSLLGKLWSAGKRKLGGESVFMTHFTNEGQGKQHVAFAAPYPGSVVAVDLDDVGGRLFCQKDSFLCAAYGTRVGIAFTKRLGAGFFGGEGFILQKLEGDGLVFVHAGGTLIRRQLNGETLRVDTGCLVAFTDGIDYDVQLAGGLKSMLFGGEGLLLTTLKGSGTVWLQSLPFSRLAGRIYDATFRAREEVRTNNG |
2OD4 Chain:A ((59-87)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIIHYPDKQTAISVFDKIKPEVDEVRTQN- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2OD4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -3065 for 114 contacts (-26.9/contact) +
2D Compatibility (PS) -3256 + (NN) -1117 + (LL) 11396
1D Compatibility (HY) -1200 + (ID) 400
Total energy: 2358.0 ( 20.68 by residue)
QMean score : 0.233
|
|
|