Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSAKNLKITFNPGTPIETRALRGLSLDIPAGQFVTVIGSNGAGKSTFLNAVSGDLPIDSGQILIDDEDVTRKPVWARANRVARVFQDPMAGTCEDLTIEENMAL-AQRRGAGRGLGRAVQA--SMRDGFRESLATLGLGLENRLGDRIGLLSGGQRQAVSLLMAALQPSRILLLDEHTAALDPRTADFVLHLTARIVAEKKLTTMMVTHSMRQALDVGERTVMLHQGQVVLDVSGEQRKGLDVPDLLAMFEKVRGEKLADDALLLG |
1JI0 Chain:A ((20-220)) | -------------------HAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHV-INRMGIALVPEGRRIFPELTVYENLMMGAYNRKDKEGIKRDLEWIFSLFPRLKERLKQLG-----------GTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVFEVIQKINQEGT-TILLVEQNALGALKVAHYGYVLETGQIVLE---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JI0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100662 for 1519 contacts (-66.3/contact) +
2D Compatibility (PS) -21739 + (NN) -9948 + (LL) 4048
1D Compatibility (HY) -16000 + (ID) 3200
Total energy: -147501.0 ( -97.10 by residue)
QMean score : 0.554
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